| SNPs Id | Position | Function |
| Scaffold_998 | 25546 | Protein MEI2-like 2 (OML2) (MEI2-like protein 2) |
| Scaffold_1006 | 20273 | Unannotated |
| Scaffold_1011 | 54994 | Unannotated |
| Scaffold_1014 | 16833 | Protein MICRORCHIDIA 6 (AtMORC6) (EC 3.6.-.-) (Protein CRT1-homolog 6) (CRT1-h6) (Protein DEFECTIVE IN MERISTEM SILENCING 11) |
| Scaffold_1014 | 16929 | Protein MICRORCHIDIA 6 (AtMORC6) (EC 3.6.-.-) (Protein CRT1-homolog 6) (CRT1-h6) (Protein DEFECTIVE IN MERISTEM SILENCING 11) |
| Scaffold_1023 | 48754 | Unannotated |
| Scaffold_1031 | 42394 | Unannotated |
| Scaffold_1048 | 7128 | Unannotated |
| Scaffold_1048 | 34910 | Unannotated |
| Scaffold_1048 | 54269 | Unannotated |
| Scaffold_1048 | 54461 | Unannotated |
| Scaffold_1065 | 31438 | Unannotated |
| Scaffold_1072 | 15872 | Unannotated |
| Scaffold_1074 | 31775 | Lipid phosphate phosphatase gamma (AtLPPG) (EC 3.1.3.-) (Phosphatidic acid phosphatase gamma) (Plastidic phosphatidic acid phosphatase gamma) |
| Scaffold_1078 | 25837 | Unannotated |
| Scaffold_1078 | 25929 | Unannotated |
| Scaffold_1112 | 16405 | Probable boron transporter 6 |
| Scaffold_1118 | 18511 | Unannotated |
| Scaffold_1118 | 18520 | Unannotated |
| Scaffold_1118 | 18598 | Unannotated |