| SNPs Id | Position | Function |
| Scaffold_1901 | 41634 | Unannotated |
| Scaffold_1901 | 41700 | Unannotated |
| Scaffold_1910 | 165 | Unannotated |
| Scaffold_1910 | 180 | Unannotated |
| Scaffold_1910 | 685 | Unannotated |
| Scaffold_1940 | 41864 | Putative disease resistance protein At5g47280 |
| Scaffold_1959 | 6280 | Unannotated |
| Scaffold_1959 | 6306 | Unannotated |
| Scaffold_1959 | 6310 | Unannotated |
| Scaffold_1973 | 37021 | Unannotated |
| Scaffold_1980 | 35066 | Unannotated |
| Scaffold_2397 | 33973 | Unannotated |
| Scaffold_2397 | 181750 | Unannotated |
| Scaffold_2397 | 181862 | Unannotated |
| Scaffold_2398 | 6195 | Unannotated |
| Scaffold_2398 | 6280 | Unannotated |
| Scaffold_2398 | 132570 | Unannotated |
| Scaffold_2398 | 132936 | Unannotated |
| Scaffold_2398 | 133519 | Unannotated |
| Scaffold_2398 | 133970 | Unannotated |