| SNP Id | Position | Function |
| Scaffold_2 | 111184 | Unannotated |
| Scaffold_2 | 122719 | Unannotated |
| Scaffold_2 | 124621 | Unannotated |
| Scaffold_2 | 224694 | Unannotated |
| Scaffold_2 | 495120 | Unannotated |
| Scaffold_2 | 495121 | Unannotated |
| Scaffold_2 | 517087 | Unannotated |
| Scaffold_2 | 520482 | Unannotated |
| Scaffold_2 | 847928 | Unannotated |
| Scaffold_2 | 959900 | Unannotated |
| Scaffold_2 | 1028910 | Unannotated |
| Scaffold_2 | 1030804 | Unannotated |
| Scaffold_2 | 1030891 | Unannotated |
| Scaffold_2 | 1099301 | Unannotated |
| Scaffold_2 | 1099334 | Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 |
| Scaffold_2 | 1099509 | LRR receptor-like serine/threonine-protein kinase (EC 2.7.11.1) (LRR receptor-like serine/threonine-protein kinase At4g26540) (Protein RECEPTOR OF RGF1) (Protein RGF1 INSENSITIVE 3) |
| Scaffold_2 | 1105394 | Probable LRR receptor-like serine/threonine-protein kinase At4g36180 (EC 2.7.11.1) |
| Scaffold_2 | 1140529 | Unannotated |
| Scaffold_2 | 2117901 | Unannotated |
| Scaffold_2 | 2117903 | Unannotated |