| SNP Id | Position | Function |
| Scaffold_591 | 8703 | Unannotated |
| Scaffold_595 | 57911 | Unannotated |
| Scaffold_595 | 57913 | Unannotated |
| Scaffold_598 | 8056 | Unannotated |
| Scaffold_598 | 66237 | GATA transcription factor 24 (Protein TIFY 2B) (ZIM-like 1 protein) |
| Scaffold_598 | 66238 | GATA transcription factor 24 (Protein TIFY 2B) (ZIM-like 1 protein) |
| Scaffold_599 | 38002 | Seed trypsin/chymotrypsin inhibitor TI5-72 |
| Scaffold_602 | 12325 | Unannotated |
| Scaffold_606 | 18905 | Unannotated |
| Scaffold_618 | 20342 | Unannotated |
| Scaffold_618 | 20395 | Unannotated |
| Scaffold_632 | 8663 | Protein JINGUBANG |
| Scaffold_632 | 59488 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (EC 2.4.99.18) (Ribophorin II) (RPN-II) (Ribophorin-2) |
| Scaffold_636 | 3732 | Unannotated |
| Scaffold_637 | 31723 | Unannotated |
| Scaffold_654 | 23818 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (EC 2.7.11.1) |
| Scaffold_654 | 49590 | Unannotated |
| Scaffold_655 | 19419 | Unannotated |
| Scaffold_657 | 27230 | Unannotated |
| Scaffold_662 | 60040 | Unannotated |