| SNP Id | Position | Function |
| Scaffold_1180 | 18868 | Unannotated |
| Scaffold_1186 | 6127 | Transcription elongation factor SPT6 homolog (AtSPT6) |
| Scaffold_1188 | 51665 | Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28 kDa cold-induced protein) |
| Scaffold_1192 | 35848 | Protein NRT1/ PTR FAMILY 6.2 (AtNPF6.2) (Nitrate transporter 1.4) |
| Scaffold_1200 | 20830 | Unannotated |
| Scaffold_1216 | 613 | DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.4.13) |
| Scaffold_1229 | 36386 | Secretory carrier-associated membrane protein 5 (Secretory carrier membrane protein 5) |
| Scaffold_1230 | 18332 | Deacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) |
| Scaffold_1231 | 51360 | Unannotated |
| Scaffold_1241 | 52549 | Unannotated |
| Scaffold_1243 | 23570 | Unannotated |
| Scaffold_1248 | 3845 | Unannotated |
| Scaffold_1250 | 20254 | Unannotated |
| Scaffold_1257 | 33521 | Unannotated |
| Scaffold_1257 | 33522 | Unannotated |
| Scaffold_1262 | 33197 | Unannotated |
| Scaffold_1268 | 34632 | Unannotated |
| Scaffold_1269 | 50438 | Unannotated |
| Scaffold_1276 | 35377 | Unannotated |
| Scaffold_1278 | 2858 | Unannotated |