| SNP Id | Position | Function |
| Scaffold_92 | 114132 | Aminopeptidase M1 (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) |
| Scaffold_92 | 114143 | Aminopeptidase M1 (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) |
| Scaffold_92 | 114166 | Aminopeptidase M1 (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) |
| Scaffold_96 | 136152 | Aldehyde dehydrogenase family 2 member C4 (EC 1.2.1.3) (ALDH1a) (Protein REDUCED EPIDERMAL FLUORESCENCE 1) |
| Scaffold_96 | 155677 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_96 | 155755 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_96 | 155782 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_96 | 155837 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_96 | 156051 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_96 | 156113 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial |
| Scaffold_106 | 128823 | DNA-directed RNA polymerase 3B, chloroplastic (EC 2.7.7.6) (NictaRpoT3-tom) (T7 bacteriophage-type single subunit RNA polymerase 3B) |
| Scaffold_106 | 128851 | DNA-directed RNA polymerase 3B, chloroplastic (EC 2.7.7.6) (NictaRpoT3-tom) (T7 bacteriophage-type single subunit RNA polymerase 3B) |
| Scaffold_112 | 76485 | Mannan endo-1,4-beta-mannosidase 3 (EC 3.2.1.78) (Beta-mannanase 3) (Endo-beta-1,4-mannanase 3) (AtMAN3) |
| Scaffold_112 | 211961 | Protein ILITYHIA |
| Scaffold_112 | 268392 | Probable protein phosphatase 2C 6 (AtPP2C06) (EC 3.1.3.16) |
| Scaffold_112 | 269008 | Probable protein phosphatase 2C 18 (AtPP2C18) (EC 3.1.3.16) |
| Scaffold_113 | 15884 | Probable serine/threonine protein kinase IRE (EC 2.7.11.1) (Protein INCOMPLETE ROOT HAIR ELONGATION) (AtIRE) |
| Scaffold_114 | 380082 | Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) |
| Scaffold_114 | 381461 | Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) |
| Scaffold_114 | 381463 | Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) |