| SNP Id | Position | Function |
| Scaffold_27 | 1570177 | Unannotated |
| Scaffold_27 | 1706081 | Unannotated |
| Scaffold_27 | 1797121 | Unannotated |
| Scaffold_27 | 1823615 | Unannotated |
| Scaffold_28 | 9478 | Unannotated |
| Scaffold_28 | 172800 | Unannotated |
| Scaffold_28 | 302365 | Unannotated |
| Scaffold_28 | 302366 | Unannotated |
| Scaffold_28 | 464300 | Unannotated |
| Scaffold_28 | 499802 | Unannotated |
| Scaffold_28 | 800377 | Alpha-glucan water dikinase, chloroplastic (EC 2.7.9.4) (Starch-related protein R1) |
| Scaffold_28 | 948789 | Unannotated |
| Scaffold_28 | 1085126 | Unannotated |
| Scaffold_28 | 1304863 | Unannotated |
| Scaffold_28 | 1455697 | Unannotated |
| Scaffold_28 | 1464036 | Unannotated |
| Scaffold_28 | 1638926 | Unannotated |
| Scaffold_28 | 1691743 | Unannotated |
| Scaffold_28 | 1831157 | Unannotated |
| Scaffold_28 | 1831158 | Unannotated |