| SNP Id | Position | Function |
| Scaffold_30 | 1874381 | Unannotated |
| Scaffold_30 | 1874600 | Unannotated |
| Scaffold_30 | 1874607 | Unannotated |
| Scaffold_31 | 24258 | Unannotated |
| Scaffold_31 | 278148 | Unannotated |
| Scaffold_31 | 638636 | Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) |
| Scaffold_31 | 638652 | Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) |
| Scaffold_31 | 690072 | Unannotated |
| Scaffold_31 | 806070 | TMV resistance protein N |
| Scaffold_31 | 875068 | Unannotated |
| Scaffold_31 | 930832 | Unannotated |
| Scaffold_31 | 1058493 | Unannotated |
| Scaffold_31 | 1371893 | Unannotated |
| Scaffold_31 | 1542830 | Unannotated |
| Scaffold_31 | 1638395 | Unannotated |
| Scaffold_32 | 92032 | Unannotated |
| Scaffold_32 | 109856 | Unannotated |
| Scaffold_32 | 199129 | Palmitoyl-acyl carrier protein thioesterase, chloroplastic (EC 3.1.2.-) (16:0-acyl-carrier protein thioesterase) (16:0-ACP thioesterase) (Acyl-[acyl-carrier-protein] hydrolase) (PATE) |
| Scaffold_32 | 296391 | Unannotated |
| Scaffold_32 | 296393 | Unannotated |