| SNP Id | Position | Function |
| Scaffold_48 | 2183070 | Unannotated |
| Scaffold_48 | 2319894 | Unannotated |
| Scaffold_48 | 2323788 | Unannotated |
| Scaffold_48 | 2589693 | Unannotated |
| Scaffold_49 | 451350 | 40S ribosomal protein S2-2 |
| Scaffold_49 | 451351 | 40S ribosomal protein S2-2 |
| Scaffold_49 | 458345 | Microtubule-associated protein 70-2 (AtMAP70-2) (70 kDa microtubule-associated protein 2) |
| Scaffold_49 | 551202 | Unannotated |
| Scaffold_49 | 571073 | Unannotated |
| Scaffold_49 | 1045789 | Unannotated |
| Scaffold_49 | 1331268 | Unannotated |
| Scaffold_49 | 1430756 | Unannotated |
| Scaffold_49 | 1975807 | Unannotated |
| Scaffold_49 | 1975808 | Unannotated |
| Scaffold_49 | 1976099 | Unannotated |
| Scaffold_49 | 1976100 | Unannotated |
| Scaffold_49 | 2070933 | Unannotated |
| Scaffold_49 | 2080910 | Unannotated |
| Scaffold_49 | 2101197 | Unannotated |
| Scaffold_49 | 2136052 | Unannotated |