| SNP Id | Position | Reference Allele | Reference Length | Alternate Allele | Alternate Length | Status |
| Scaffold_47 | 531442 | ATTTTTTTTT | 10 | ATTTTTTTT | 9 | INS |
| Scaffold_47 | 831779 | CAAAAAAAAAA | 11 | CAAAAAAAAA | 10 | INS |
| Scaffold_47 | 906733 | ATTTTTTTTTTT | 12 | ATTTTTTTTTT | 11 | INS |
| Scaffold_47 | 1126266 | ATTTTTTTTT | 10 | ATTTTTTTTTT | 11 | DEL |
| Scaffold_47 | 1594419 | CTTTTTTTTT | 10 | CTTTTTTTT | 9 | INS |
| Scaffold_47 | 1753090 | TAAAAAAAAA | 10 | TAAAAAAAAAA | 11 | DEL |
| Scaffold_471 | 54475 | CTTTTTTTTTTT | 12 | CTTTTTTTTTT | 11 | INS |
| Scaffold_48 | 162806 | GAAAAAAAAAA | 11 | GAAAAAAAAA | 10 | INS |
| Scaffold_48 | 229911 | GGAGAGAGAGAGAGAGAGAG | 20 | GGAGAGAGAGAGAGAGAG | 18 | INS |
| Scaffold_48 | 337810 | ATTTTTTTTTTTT | 13 | ATTTTTTTTTTTTT | 14 | DEL |
| Scaffold_48 | 632653 | CTTTTTTTTT | 10 | CTTTTTTTTTT | 11 | DEL |
| Scaffold_48 | 780861 | GAAAAAAAAAAAA | 13 | GAAAAAAAAAAAAA | 14 | DEL |
| Scaffold_48 | 1918492 | TAAAAAAAAA | 10 | TAAAAAAAAAA | 11 | DEL |
| Scaffold_48 | 1991730 | GAAAAAAAAAAA | 12 | GAAAAAAAAAAAA,GAAAAAAAAAAAAA | 28 | DEL |
| Scaffold_48 | 2006013 | TTCTCTCTCTCTCT | 14 | TTCTCTCTCTCT | 12 | INS |
| Scaffold_48 | 2149270 | CTTTTTTTTTTT | 12 | CTTTTTTTTTTTTT | 14 | DEL |
| Scaffold_48 | 2273538 | GAAAAAAAAAAA | 12 | GAAAAAAAAAAAA,GAAAAAAAAAA | 25 | DEL |
| Scaffold_48 | 2319881 | GAAAAAAAAAAAA | 13 | GAAAAAAAAAAA | 12 | INS |
| Scaffold_48 | 2459575 | CAAAAAAAAAAAAA | 14 | CAAAAAAAAAAAAAA | 15 | DEL |
| Scaffold_48 | 2508998 | CAAAAAAAAAAAAA | 14 | CAAAAAAAAAAAA | 13 | INS |