| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2 | 59120 | G | C | 20 | 74.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 131398 | A | C | 33 | 897.89 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 188661 | A | C | 25 | 31.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 220421 | C | A | 43 | 920.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 227429 | C | A | 43 | 568.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 345924 | C | A | 20 | 40.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 1016828 | T | G | 40 | 36.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 1029873 | A | C | 14 | 359.22 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 1099447 | A | T | 29 | 637.77 | exon | Transversion | 0/1 | LRR receptor-like serine/threonine-protein kinase (EC 2.7.11.1) (LRR receptor-like serine/threonine-protein kinase At4g26540) (Protein RECEPTOR OF RGF1) (Protein RGF1 INSENSITIVE 3) |
| Scaffold_2 | 1129264 | G | C | 13 | 55.77 | CDS | Transversion | 0/1 | LRR receptor-like serine/threonine-protein kinase (EC 2.7.11.1) (LRR receptor-like serine/threonine-protein kinase At4g26540) (Protein RECEPTOR OF RGF1) (Protein RGF1 INSENSITIVE 3) |
| Scaffold_2 | 1576050 | A | C | 245 | 631.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 2103382 | T | A | 10 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 2155349 | G | C | 15 | 120.77 | intron | Transversion | 0/1 | Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 |
| Scaffold_2 | 2210250 | G | T | 12 | 36.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 2442747 | G | T | 19 | 62.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 2572163 | G | C | 24 | 758.78 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_2 | 2584106 | G | T | 18 | 437.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2 | 2839043 | T | A | 13 | 36.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_4 | 210910 | A | C | 17 | 46.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_4 | 215354 | C | A | 11 | 30.77 | exon | Transversion | 0/1 | Unannotated |