| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2752 | 8534 | A | C | 246 | 545.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2755 | 34604 | C | A | 18 | 30.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2756 | 27728 | C | G | 209 | 7468.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2757 | 7780 | A | C | 14 | 52.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2758 | 1712 | G | T | 29 | 42.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2760 | 17308 | A | C | 187 | 3634.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2760 | 17309 | G | C | 250 | 6485.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2760 | 17315 | A | T | 246 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2763 | 47735 | C | A | 15 | 104.77 | CDS | Transversion | 0/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2763 | 47793 | G | C | 14 | 97.77 | CDS | Transversion | 0/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2763 | 47836 | A | T | 10 | 169.78 | CDS | Transversion | 0/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2763 | 48355 | A | C | 19 | 529.53 | CDS | Transversion | 1/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2765 | 49354 | T | A | 37 | 32.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2775 | 49304 | T | G | 16 | 70.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2775 | 49414 | A | C | 29 | 351.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2779 | 47851 | A | C | 29 | 794.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_2779 | 50438 | T | A | 12 | 181.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2786 | 818 | A | T | 26 | 718.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2786 | 819 | C | A | 240 | 6825.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2786 | 820 | A | T | 250 | 8507.77 | noncoding | Transversion | 1/1 | Unannotated |