| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2817 | 54277 | G | C | 40 | 46.74 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_2828 | 79853 | A | T | 33 | 59.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2831 | 19953 | C | A | 11 | 271.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2841 | 3 | G | C | 250 | 419.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_2841 | 103 | G | T | 105 | 3867.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_2841 | 8630 | T | G | 24 | 54.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_2852 | 4420 | A | C | 33 | 845.56 | exon | Transversion | 0/1 | Amino acid permease 3 (Amino acid transporter AAP3) |
| Scaffold_2852 | 4591 | T | A | 250 | 8562.77 | exon | Transversion | 1/1 | Amino acid permease 3 (Amino acid transporter AAP3) |
| Scaffold_2855 | 13526 | A | T | 107 | 32.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2888 | 19710 | T | G | 250 | 2464.77 | exon | Transversion | 0/1 | 60S ribosomal protein L6-3 |
| Scaffold_2888 | 19718 | C | A | 250 | 2380.77 | exon | Transversion | 0/1 | 60S ribosomal protein L6-3 |
| Scaffold_2888 | 19719 | G | C | 250 | 1985.77 | exon | Transversion | 0/1 | 60S ribosomal protein L6-3 |
| Scaffold_2888 | 19812 | T | G | 171 | 1437.77 | exon | Transversion | 0/1 | 60S ribosomal protein L6-3 |
| Scaffold_2888 | 45435 | A | T | 62 | 42.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2888 | 45629 | A | C | 52 | 60.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2888 | 45660 | T | G | 33 | 33.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2888 | 45739 | G | T | 17 | 72.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2893 | 319 | T | G | 109 | 2834.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2893 | 320 | G | C | 40 | 322.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_2901 | 2206 | T | G | 250 | 437.77 | noncoding | Transversion | 0/1 | Unannotated |