| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3408 | 55027 | G | C | 23 | 79.77 | exon | Transversion | 0/1 | Ankyrin repeat protein SKIP35 (SKP1-interacting partner 35) |
| Scaffold_3408 | 55678 | C | A | 55 | 430.77 | CDS | Transversion | 0/1 | Ankyrin repeat protein SKIP35 (SKP1-interacting partner 35) |
| Scaffold_3408 | 56359 | A | T | 100 | 1825.77 | CDS | Transversion | 0/1 | Ankyrin repeat protein SKIP35 (SKP1-interacting partner 35) |
| Scaffold_3408 | 56964 | G | T | 19 | 95.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3412 | 2676 | A | T | 45 | 1397.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3412 | 2686 | T | G | 250 | 226.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3414 | 5132 | C | A | 104 | 3714.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3415 | 393 | T | G | 17 | 37.77 | noncoding | Transversion | 0/1 | DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) (Fragment) |
| Scaffold_3420 | 56977 | G | T | 21 | 275.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3431 | 18551 | G | T | 250 | 240.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3431 | 18662 | T | G | 45 | 1523.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_3432 | 18911 | G | T | 250 | 100.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3442 | 12145 | A | C | 250 | 324.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3444 | 18791 | G | C | 248 | 51.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3444 | 18792 | A | T | 248 | 212.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_3446 | 4068 | A | T | 16 | 200.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3446 | 37762 | A | T | 14 | 55.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3446 | 37763 | A | C | 14 | 55.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3446 | 37864 | T | A | 20 | 52.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3446 | 42546 | A | C | 18 | 66.77 | noncoding | Transversion | 0/1 | Unannotated |