| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3448 | 53970 | G | C | 15 | 36.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3461 | 23385 | T | A | 250 | 220.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23406 | C | G | 249 | 236.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23593 | G | C | 250 | 191.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 23594 | A | T | 248 | 591.77 | CDS | Transversion | 0/1 | Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39) |
| Scaffold_3461 | 54876 | T | G | 51 | 1324.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3461 | 55087 | A | C | 85 | 1553.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 73805 | A | T | 250 | 669.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 73813 | A | T | 246 | 1445.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74138 | A | C | 250 | 470.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74190 | A | T | 247 | 79.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74231 | G | C | 246 | 437.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74243 | C | G | 250 | 71.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74255 | A | C | 250 | 142.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74293 | A | C | 250 | 312.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74345 | A | C | 249 | 208.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74380 | A | C | 250 | 592.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74418 | A | C | 250 | 249.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74457 | T | A | 250 | 717.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_3463 | 74465 | A | C | 249 | 131.77 | CDS | Transversion | 0/1 | Unannotated |