| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_13 | 2656485 | T | C | 250 | 4018.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2656506 | C | T | 250 | 3453.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2656575 | T | C | 237 | 3501.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2657166 | C | T | 159 | 4153.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2657168 | C | T | 161 | 4172.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2657244 | A | G | 79 | 1923.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2666648 | A | G | 14 | 84.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2737688 | C | T | 12 | 30.77 | exon | Transition | 0/1 | LRR receptor-like serine/threonine-protein kinase GSO1 (EC 2.7.11.1) (Protein GASSHO 1) (Protein SCHENGEN 3) |
| Scaffold_13 | 2814788 | T | C | 33 | 50.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 2815576 | G | A | 15 | 61.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3101521 | A | G | 20 | 31.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3101522 | T | C | 17 | 34.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3269437 | C | T | 16 | 46.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3375807 | G | A | 21 | 34.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3419539 | C | T | 15 | 120.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3505453 | G | A | 16 | 46.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3506966 | T | C | 30 | 41.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3508002 | A | G | 179 | 765.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3508445 | A | G | 64 | 254.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_13 | 3508763 | A | G | 13 | 55.77 | noncoding | Transition | 0/1 | Unannotated |