| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_31 | 1585668 | C | T | 12 | 161.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_32 | 48321 | T | C | 19 | 30.77 | CDS | Transition | 0/1 | Kinesin-like protein KIN-13B (AtKINESIN-13B) (AtKIN13B) |
| Scaffold_32 | 136591 | A | G | 16 | 83.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_32 | 585631 | A | G | 13 | 61.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_32 | 610735 | C | T | 19 | 34.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_32 | 695218 | T | C | 221 | 6158.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 696142 | A | G | 51 | 1017.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_32 | 697415 | A | G | 155 | 5567.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697451 | G | A | 95 | 3242.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697463 | A | G | 44 | 1417.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697542 | T | C | 185 | 5686.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697748 | G | A | 87 | 3142.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697883 | C | T | 182 | 4829.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 697890 | T | C | 211 | 5813.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_32 | 863551 | A | G | 43 | 642.77 | CDS | Transition | 0/1 | Chaperone protein ClpC, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpC homolog) (Casein lytic proteinase C) |
| Scaffold_32 | 863560 | A | G | 44 | 674.77 | CDS | Transition | 0/1 | Chaperone protein ClpC, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpC homolog) (Casein lytic proteinase C) |
| Scaffold_32 | 863689 | T | C | 50 | 520.77 | CDS | Transition | 0/1 | Chaperone protein ClpC, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpC homolog) (Casein lytic proteinase C) |
| Scaffold_32 | 863698 | T | C | 62 | 967.77 | CDS | Transition | 0/1 | Chaperone protein ClpC, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpC homolog) (Casein lytic proteinase C) |
| Scaffold_32 | 863743 | G | A | 27 | 185.77 | CDS | Transition | 0/1 | Chaperone protein ClpC, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpC homolog) (Casein lytic proteinase C) |
| Scaffold_32 | 979584 | G | A | 13 | 55.77 | CDS | Transition | 0/1 | Unannotated |