| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_34 | 862073 | A | G | 250 | 5124.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 862111 | T | C | 250 | 3306.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 950213 | T | C | 27 | 94.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 950222 | T | C | 25 | 121.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1152797 | T | C | 250 | 577.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1155744 | A | G | 39 | 55.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1155747 | G | A | 41 | 55.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1156715 | A | G | 43 | 685.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1156964 | G | A | 26 | 70.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1156988 | A | G | 37 | 622.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1156999 | T | C | 37 | 611.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1157024 | C | T | 35 | 218.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1157036 | C | T | 26 | 81.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1458591 | G | A | 15 | 46.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1460567 | A | G | 17 | 202.77 | CDS | Transition | 0/1 | Histone acetyltransferase HAC1 (EC 2.3.1.48) |
| Scaffold_34 | 1564689 | T | C | 12 | 32.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1790813 | C | T | 10 | 30.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1891244 | A | G | 14 | 339.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1891245 | A | G | 12 | 280.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_34 | 1961670 | A | G | 31 | 32.77 | exon | Transition | 0/1 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 (OsLecRK2) (EC 2.7.11.1) |