| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_71 | 696723 | A | G | 12 | 218.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_71 | 724872 | G | A | 37 | 1045.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_71 | 1051694 | T | C | 24 | 31.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_71 | 1116247 | C | T | 24 | 31.77 | CDS | Transition | 0/1 | Receptor-like serine/threonine-protein kinase ALE2 (EC 2.7.11.1) (Protein ABNORMAL LEAF SHAPE 2) |
| Scaffold_71 | 1126144 | G | A | 10 | 84.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_71 | 1290210 | A | G | 57 | 46.74 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_71 | 1378555 | A | G | 21 | 37.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_72 | 188227 | A | G | 21 | 40.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_72 | 214305 | T | C | 13 | 86.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_72 | 274600 | A | G | 11 | 39.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_72 | 331665 | T | C | 23 | 34.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_72 | 442303 | T | C | 15 | 271.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_72 | 442308 | G | A | 28 | 65.77 | intron | Transition | 0/1 | Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) |
| Scaffold_72 | 454279 | G | A | 250 | 9184.77 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_72 | 492257 | G | A | 11 | 39.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_72 | 562069 | T | C | 71 | 2671.77 | intron | Transition | 1/1 | Unannotated |
| Scaffold_72 | 647307 | T | C | 14 | 36.77 | CDS | Transition | 0/1 | Thioredoxin M3, chloroplastic (AtTrxm3) (Protein GFP ARRESTED TRAFFICKING 1) |
| Scaffold_72 | 775351 | C | T | 15 | 33.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_72 | 875743 | A | G | 10 | 70.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_72 | 878108 | A | G | 12 | 58.77 | CDS | Transition | 0/1 | Unannotated |