| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_112 | 108997 | A | G | 15 | 360.03 | exon | Transition | 0/1 | Unannotated |
| Scaffold_112 | 174212 | G | A | 38 | 204.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_112 | 277320 | T | C | 24 | 130.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_112 | 330288 | A | G | 12 | 33.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_112 | 406564 | A | G | 11 | 58.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_113 | 388731 | G | A | 12 | 67.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_113 | 497949 | A | G | 16 | 55.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_113 | 501109 | A | G | 37 | 161.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_114 | 39922 | G | A | 17 | 72.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_114 | 164519 | A | G | 10 | 58.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_114 | 381366 | T | C | 33 | 100.77 | exon | Transition | 0/1 | Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase) |
| Scaffold_115 | 81574 | C | T | 19 | 46.77 | exon | Transition | 0/1 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B (Oligosaccharyl transferase subunit STT3B) (STT3-B) (EC 2.4.99.18) (Protein STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B) |
| Scaffold_115 | 168987 | A | G | 10 | 30.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_115 | 218443 | T | C | 10 | 163.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_115 | 293608 | T | C | 28 | 31.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_116 | 115536 | G | A | 15 | 92.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_116 | 153498 | G | A | 13 | 67.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_116 | 220060 | T | C | 32 | 62.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_117 | 9188 | T | C | 15 | 43.77 | CDS | Transition | 0/1 | Polyol transporter 5 (Protein POLYOL TRANSPORTER 5) (AtPLT5) (Sugar-proton symporter PLT5) |
| Scaffold_117 | 98045 | C | T | 19 | 34.77 | exon | Transition | 0/1 | Unannotated |