| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_159 | 221018 | T | C | 249 | 977.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221031 | T | C | 250 | 655.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221044 | T | C | 250 | 971.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221070 | A | G | 249 | 1175.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221093 | T | C | 250 | 541.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221109 | T | C | 250 | 89.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 221118 | T | C | 250 | 145.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_159 | 255332 | T | C | 96 | 360.77 | exon | Transition | 0/1 | Putative glycerol-3-phosphate transporter 1 (G-3-P transporter 1) (Glycerol-3-phosphate permease 1) (AtG3Pp1) (G-3-P permease 1) (Protein PHOSPHATE STARVATION-INDUCED GENE 3) (AtPS3) |
| Scaffold_160 | 15739 | T | C | 36 | 67.77 | CDS | Transition | 0/1 | Clathrin heavy chain 2 |
| Scaffold_160 | 15745 | G | A | 49 | 34.77 | CDS | Transition | 0/1 | Clathrin heavy chain 2 |
| Scaffold_160 | 16985 | C | T | 40 | 1160.77 | CDS | Transition | 1/1 | Clathrin heavy chain 2 |
| Scaffold_160 | 249303 | A | G | 20 | 151.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_160 | 443251 | C | T | 30 | 34.77 | CDS | Transition | 0/1 | CDK5RAP1-like protein |
| Scaffold_160 | 443351 | G | A | 24 | 31.77 | CDS | Transition | 0/1 | CDK5RAP1-like protein |
| Scaffold_160 | 487442 | G | A | 19 | 334.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_160 | 487451 | G | A | 19 | 331.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_160 | 519320 | T | C | 39 | 601.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_160 | 519343 | C | T | 23 | 356.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_161 | 132158 | T | C | 11 | 153.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_161 | 132224 | T | C | 15 | 263.77 | CDS | Transition | 0/1 | Unannotated |