M-83 SNPs

SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_2706 576 C T 60 478.77 CDS Transition 0/1 Unannotated
Scaffold_2706 598 C T 55 455.77 CDS Transition 0/1 Unannotated
Scaffold_2706 624 C T 35 260.77 CDS Transition 0/1 Unannotated
Scaffold_2706 950 A G 13 39.77 intron Transition 0/1 Unannotated
Scaffold_2706 1535 G A 20 154.77 CDS Transition 0/1 Unannotated
Scaffold_2706 1869 T C 15 347.77 intron Transition 0/1 Unannotated
Scaffold_2706 1872 C T 15 333.77 intron Transition 0/1 Unannotated
Scaffold_2706 1978 G A 22 86.77 CDS Transition 0/1 Unannotated
Scaffold_2708 13179 T C 121 37.77 exon Transition 0/1 Unannotated
Scaffold_2708 13218 T C 249 80.77 exon Transition 0/1 Unannotated
Scaffold_2708 13239 T C 250 348.77 exon Transition 0/1 Unannotated
Scaffold_2712 29657 G A 250 1388.77 noncoding Transition 0/1 Unannotated
Scaffold_2716 45206 C T 72 1663.77 noncoding Transition 1/1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1)
Scaffold_2721 49864 C T 126 1641.77 noncoding Transition 0/1 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
Scaffold_2724 12171 T C 20 40.77 noncoding Transition 0/1 Unannotated
Scaffold_2724 12413 G A 112 2561.77 noncoding Transition 0/1 Unannotated
Scaffold_2724 12431 G A 127 2448.77 noncoding Transition 0/1 Unannotated
Scaffold_2724 12560 G A 212 5545.77 noncoding Transition 0/1 Unannotated
Scaffold_2724 12605 G A 94 1647.77 noncoding Transition 0/1 Unannotated
Scaffold_2724 12629 G A 46 43.77 noncoding Transition 0/1 Unannotated