| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3040 | 26884 | T | C | 25 | 141.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 26915 | T | C | 15 | 252.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 26918 | T | C | 15 | 252.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 56343 | G | A | 236 | 3736.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3040 | 78153 | T | C | 250 | 1538.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3046 | 1319 | A | G | 12 | 242.9 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3047 | 12302 | C | T | 31 | 341.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3047 | 12379 | G | A | 247 | 3437.77 | exon | Transition | 1/1 | Unannotated |
| Scaffold_3047 | 12409 | G | A | 155 | 2500.77 | exon | Transition | 1/1 | Unannotated |
| Scaffold_3047 | 12502 | A | G | 35 | 56.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3051 | 5303 | A | G | 250 | 49.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3051 | 5324 | A | G | 250 | 72.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3051 | 5363 | A | G | 250 | 278.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3051 | 44520 | C | T | 198 | 2419.77 | noncoding | Transition | 0/1 | NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B) |
| Scaffold_3060 | 3807 | G | A | 36 | 52.74 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_3061 | 33627 | T | C | 250 | 1054.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3061 | 33677 | A | G | 250 | 1366.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3061 | 33686 | T | C | 250 | 59.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3061 | 33700 | A | G | 249 | 576.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3061 | 33725 | A | G | 250 | 81.77 | noncoding | Transition | 0/1 | Unannotated |