| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3166 | 22151 | G | A | 250 | 1240.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51207 | A | G | 21 | 488.53 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51537 | G | A | 15 | 248.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51540 | C | T | 17 | 328.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51549 | T | C | 20 | 57.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51564 | A | G | 24 | 57.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 51639 | T | C | 76 | 1803.88 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3166 | 51648 | G | A | 76 | 1773.98 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3166 | 51758 | G | A | 144 | 3313.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3166 | 51858 | G | A | 103 | 2794.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3166 | 52068 | C | T | 69 | 2027.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 52077 | A | G | 53 | 1569.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 52155 | T | C | 37 | 777.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 52263 | A | G | 31 | 777.88 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 52272 | T | C | 33 | 826.1 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3166 | 52308 | A | G | 29 | 610.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3167 | 31031 | C | T | 250 | 173.41 | noncoding | Transition | 0/1 | DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'') (Fragment) |
| Scaffold_3170 | 22763 | A | G | 24 | 405.77 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_3170 | 22775 | T | C | 250 | 234.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3170 | 22808 | G | A | 250 | 1929.77 | noncoding | Transition | 0/1 | Unannotated |