| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3302 | 3317 | T | C | 54 | 511.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3302 | 3354 | C | T | 69 | 787.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3303 | 1209 | A | G | 34 | 41.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3303 | 1210 | A | G | 23 | 31.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3306 | 39797 | A | G | 17 | 30.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3307 | 60415 | A | G | 250 | 101.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3307 | 60416 | T | C | 250 | 122.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3307 | 60419 | A | G | 250 | 164.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3307 | 60447 | A | G | 250 | 76.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3307 | 60449 | A | G | 250 | 218.77 | intron | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 8991 | C | T | 168 | 291.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 8999 | T | C | 155 | 254.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 9046 | A | G | 20 | 256.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 9049 | A | G | 11 | 128.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 9311 | A | G | 208 | 1989.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 18627 | G | A | 16 | 451.77 | CDS | Transition | 0/1 | Unannotated |
| Scaffold_3312 | 18657 | C | T | 25 | 749.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3312 | 18740 | C | T | 87 | 3124.77 | CDS | Transition | 1/1 | Unannotated |
| Scaffold_3315 | 35319 | C | T | 16 | 78.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3326 | 12441 | G | A | 57 | 60.77 | CDS | Transition | 0/1 | COP1-interactive protein 1 |