| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3470 | 44011 | C | T | 250 | 847.77 | noncoding | Transition | 0/1 | Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19) |
| Scaffold_3470 | 44023 | C | T | 250 | 111.77 | noncoding | Transition | 0/1 | Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19) |
| Scaffold_3470 | 44071 | C | T | 186 | 3807.77 | noncoding | Transition | 0/1 | Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19) |
| Scaffold_3470 | 44086 | C | T | 154 | 877.77 | noncoding | Transition | 0/1 | Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19) |
| Scaffold_3470 | 44106 | C | T | 76 | 2170.77 | noncoding | Transition | 0/1 | Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19) |
| Scaffold_3471 | 3058 | C | T | 209 | 1003.77 | noncoding | Transition | 0/1 | NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 6) (NADH-plastoquinone oxidoreductase subunit 6) |
| Scaffold_3471 | 3325 | T | C | 250 | 423.77 | noncoding | Transition | 0/1 | NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1) |
| Scaffold_3471 | 3495 | C | T | 250 | 1347.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3472 | 17780 | T | C | 26 | 606.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3472 | 17786 | A | G | 24 | 529.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3472 | 36865 | G | A | 38 | 175.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3472 | 37069 | G | A | 25 | 71.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3472 | 37806 | G | A | 15 | 194.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3476 | 55137 | C | T | 248 | 2573.77 | noncoding | Transition | 0/1 | 30S ribosomal protein S16, chloroplastic |
| Scaffold_3477 | 26673 | A | G | 11 | 110.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3477 | 56386 | T | C | 13 | 192.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3477 | 60601 | G | A | 44 | 112.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3477 | 60634 | G | A | 42 | 293.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3477 | 60645 | G | A | 43 | 148.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3477 | 60658 | G | A | 31 | 194.77 | exon | Transition | 0/1 | Unannotated |