| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_41 | 315897 | C | A | 10 | 110.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 561382 | A | T | 13 | 34.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 610881 | A | T | 11 | 113.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 613799 | C | A | 12 | 195.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1198102 | G | T | 10 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1198103 | A | C | 10 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1198218 | C | A | 14 | 33.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1236549 | C | G | 25 | 57.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1329998 | T | G | 19 | 43.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1330000 | A | T | 19 | 52.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1559602 | T | A | 91 | 101.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1753524 | A | C | 34 | 50.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_41 | 1907412 | C | A | 25 | 46.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 91313 | T | G | 17 | 46.77 | exon | Transversion | 0/1 | Receptor-like protein kinase HAIKU2 (EC 2.7.11.1) |
| Scaffold_42 | 99938 | G | T | 12 | 58.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 100038 | T | A | 17 | 46.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 190051 | A | C | 10 | 55.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 394706 | T | A | 11 | 58.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 441390 | C | A | 16 | 30.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_42 | 632509 | A | T | 250 | 7193.77 | CDS | Transversion | 0/1 | Unannotated |