| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3731 | 29572 | G | A | 250 | 8880.77 | noncoding | Transition | 1/1 | Photosystem I assembly protein Ycf4 |
| Scaffold_3733 | 43870 | A | G | 38 | 219.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3733 | 43933 | G | A | 29 | 533.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3733 | 43976 | A | G | 23 | 615.28 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_3733 | 44047 | C | T | 42 | 855.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3733 | 44223 | G | A | 26 | 607.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3733 | 44333 | A | G | 13 | 308.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3736 | 45567 | C | T | 248 | 178.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3736 | 45673 | A | G | 66 | 1969.77 | noncoding | Transition | 1/1 | Unannotated |
| Scaffold_3737 | 29613 | C | T | 12 | 52.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3746 | 4584 | C | T | 190 | 2610.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3746 | 5322 | T | C | 50 | 45.77 | noncoding | Transition | 0/1 | Unannotated |
| Scaffold_3746 | 5727 | C | T | 162 | 346.77 | exon | Transition | 0/1 | Unannotated |
| Scaffold_3746 | 6400 | C | T | 122 | 966.77 | intron | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6405 | C | T | 139 | 98.77 | intron | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6786 | C | T | 250 | 6357.77 | exon | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6921 | C | T | 246 | 159.77 | noncoding | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6987 | C | T | 249 | 8262.77 | noncoding | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3748 | 37315 | A | G | 115 | 49.74 | exon | Transition | 1/1 | Unannotated |
| Scaffold_3749 | 54808 | G | A | 79 | 756.77 | CDS | Transition | 0/1 | Unannotated |