| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_59 | 469918 | G | T | 16 | 40.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_59 | 470018 | C | G | 30 | 31.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_59 | 644725 | A | T | 43 | 1288.74 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_59 | 644726 | A | C | 71 | 1354.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_59 | 1196527 | G | T | 11 | 58.77 | exon | Transversion | 0/1 | Protein CROWDED NUCLEI 4 (Protein LITTLE NUCLEI 4) |
| Scaffold_59 | 1251341 | T | A | 10 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 186696 | T | G | 33 | 53.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 186822 | T | A | 24 | 37.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 186825 | C | G | 23 | 37.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 370641 | G | C | 27 | 53.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 370642 | G | T | 30 | 47.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 370882 | T | G | 37 | 1043.78 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_60 | 646675 | A | C | 18 | 37.77 | exon | Transversion | 0/1 | Zinc finger protein BALDIBIS (ID1-like zinc finger protein 1) (Protein indeterminate-domain 9) |
| Scaffold_60 | 844932 | T | A | 23 | 37.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 945208 | G | C | 19 | 63.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 1043541 | T | G | 250 | 513.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_60 | 1456078 | C | G | 11 | 30.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_61 | 14314 | G | T | 62 | 359.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_61 | 14457 | C | A | 69 | 177.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_61 | 15225 | C | A | 64 | 1897.77 | exon | Transversion | 0/1 | Unannotated |