| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_104 | 230068 | T | A | 15 | 320.9 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_104 | 241703 | T | A | 27 | 130.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_105 | 61088 | G | C | 91 | 62.77 | CDS | Transversion | 0/1 | Stromal 70 kDa heat shock-related protein, chloroplastic |
| Scaffold_105 | 61089 | A | T | 98 | 38.77 | CDS | Transversion | 0/1 | Stromal 70 kDa heat shock-related protein, chloroplastic |
| Scaffold_105 | 61853 | A | T | 11 | 76.77 | intron | Transversion | 0/1 | Stromal 70 kDa heat shock-related protein, chloroplastic |
| Scaffold_105 | 61958 | T | A | 10 | 166.77 | intron | Transversion | 0/1 | Heat shock 70 kDa protein, mitochondrial |
| Scaffold_105 | 286752 | A | T | 46 | 1550.77 | intron | Transversion | 1/1 | Unannotated |
| Scaffold_105 | 464797 | C | G | 19 | 77.77 | exon | Transversion | 0/1 | Probable apyrase 7 (AtAPY7) (EC 3.6.1.5) (ATP-diphosphatase) (ATP-diphosphohydrolase) (Adenosine diphosphatase) (ADPase) (NTPDase) (Nucleoside triphosphate diphosphohydrolase 7) |
| Scaffold_106 | 55881 | T | G | 13 | 126.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 169367 | C | G | 18 | 30.77 | CDS | Transversion | 0/1 | Probable serine/threonine-protein kinase PIX7 (EC 2.7.11.1) |
| Scaffold_106 | 176394 | T | G | 10 | 266.9 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 267532 | T | G | 20 | 46.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 319485 | G | C | 32 | 278.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 319503 | G | C | 24 | 452.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 319540 | T | G | 20 | 86.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 319647 | C | G | 26 | 675.79 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 389776 | A | T | 14 | 52.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_106 | 392092 | T | A | 54 | 32.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_107 | 32918 | T | A | 10 | 209.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_107 | 285797 | T | G | 10 | 55.77 | exon | Transversion | 0/1 | Unannotated |