| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_143 | 495659 | G | C | 13 | 95.77 | exon | Transversion | 0/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_143 | 495698 | T | A | 12 | 60.77 | exon | Transversion | 0/1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_144 | 82631 | T | G | 14 | 43.77 | exon | Transversion | 0/1 | Probable receptor-like protein kinase At1g11050 (EC 2.7.11.1) |
| Scaffold_144 | 447145 | G | C | 12 | 36.77 | CDS | Transversion | 0/1 | Glucosamine inositolphosphorylceramide transferase 1 (EC 2.4.99.-) (Glycosyltransferase family protein 64 protein C5) (GT64 C5) |
| Scaffold_145 | 406598 | T | G | 44 | 35.77 | CDS | Transversion | 0/1 | Chloroplast envelope membrane 70 kDa heat shock-related protein |
| Scaffold_146 | 1203 | A | C | 16 | 308.77 | CDS | Transversion | 0/1 | 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase) |
| Scaffold_146 | 110554 | C | A | 21 | 111.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 111511 | T | G | 25 | 554.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 111743 | T | G | 13 | 67.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 111866 | C | G | 22 | 187.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 112140 | T | A | 12 | 69.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 112729 | C | G | 13 | 189.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 147606 | A | T | 11 | 54.77 | CDS | Transversion | 0/1 | Ethylene-responsive transcription factor RAP2-2 (AtRAP2.2) (Protein RELATED TO APETALA2 2) |
| Scaffold_146 | 147607 | G | C | 11 | 61.77 | CDS | Transversion | 0/1 | Ethylene-responsive transcription factor RAP2-2 (AtRAP2.2) (Protein RELATED TO APETALA2 2) |
| Scaffold_146 | 190574 | C | A | 36 | 44.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 198799 | C | A | 97 | 32.77 | CDS | Transversion | 0/1 | Serine hydroxymethyltransferase 2, mitochondrial (SHMT2) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 2) (Serine methylase 2) |
| Scaffold_146 | 199901 | A | T | 27 | 78.77 | CDS | Transversion | 0/1 | Serine hydroxymethyltransferase 2, mitochondrial (SHMT2) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 2) (Serine methylase 2) |
| Scaffold_146 | 214330 | G | C | 25 | 56.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 255426 | T | A | 44 | 186.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_146 | 326014 | T | G | 50 | 51.77 | exon | Transversion | 0/1 | Unannotated |