| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_171 | 661061 | C | G | 22 | 40.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 9551 | T | G | 88 | 803.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 9573 | A | C | 71 | 797.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 9575 | A | C | 73 | 911.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 9682 | C | A | 26 | 252.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 9832 | A | T | 17 | 168.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 180810 | A | C | 10 | 52.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 281941 | C | G | 29 | 151.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282012 | G | C | 81 | 699.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282044 | A | C | 71 | 616.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282114 | A | T | 46 | 319.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 282154 | C | A | 28 | 68.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 558044 | G | C | 18 | 240.77 | exon | Transversion | 0/1 | Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-) (Protein ROS4) (Repressor of silencing 4) |
| Scaffold_172 | 559069 | C | G | 11 | 58.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 633729 | A | T | 11 | 30.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 684454 | G | T | 10 | 61.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_172 | 684553 | T | A | 40 | 59.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_173 | 18909 | C | G | 12 | 52.77 | CDS | Transversion | 0/1 | Chaperone protein ClpB3, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 3) (Casein lytic proteinase B3) (Protein ALBINO OR PALE GREEN 6) |
| Scaffold_173 | 79068 | A | C | 17 | 146.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_173 | 81565 | A | C | 26 | 401.77 | CDS | Transversion | 0/1 | Unannotated |