| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_761 | 56561 | A | C | 23 | 380.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_761 | 64914 | T | G | 20 | 366.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_761 | 64916 | A | T | 33 | 795.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_764 | 57597 | G | T | 16 | 37.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_767 | 7119 | G | T | 24 | 34.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_767 | 21814 | G | T | 61 | 76.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_786 | 10425 | T | A | 139 | 607.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_788 | 62770 | T | A | 11 | 30.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_797 | 34886 | G | T | 250 | 8261.77 | exon | Transversion | 1/1 | 40S ribosomal protein S16 |
| Scaffold_798 | 63668 | T | A | 14 | 52.77 | intron | Transversion | 0/1 | Unannotated |
| Scaffold_804 | 40132 | A | C | 18 | 46.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_812 | 22346 | T | A | 37 | 663.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_812 | 22669 | T | A | 165 | 2951.77 | CDS | Transversion | 0/1 | Unannotated |
| Scaffold_843 | 53139 | C | A | 22 | 700.77 | noncoding | Transversion | 1/1 | Unannotated |
| Scaffold_853 | 28524 | T | A | 24 | 31.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_857 | 61430 | G | C | 27 | 539.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_861 | 1159 | C | A | 10 | 58.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_861 | 55911 | A | C | 19 | 40.77 | exon | Transversion | 0/1 | Unannotated |
| Scaffold_862 | 35273 | C | G | 20 | 37.77 | noncoding | Transversion | 0/1 | Unannotated |
| Scaffold_863 | 24831 | G | C | 50 | 830.77 | CDS | Transversion | 0/1 | Ferredoxin-dependent glutamate synthase, chloroplastic (EC 1.4.7.1) (Fd-GOGAT) |