| SNP Id | Position | Reference Allele | Reference Length | Alternate Allele | Alternate Length | Status |
| Scaffold_3872 | 7812 | CTTTTTTTTTTTT | 13 | CTTTTTTTTTTTTT | 14 | INS |
| Scaffold_3874 | 13299 | ATTTTTTTTTTTT | 13 | ATTTTTTTTTTTTT | 14 | INS |
| Scaffold_3888 | 20015 | ATTTTTTTTTTT | 12 | ATTTTTTTTTTTT | 13 | INS |
| Scaffold_3889 | 47034 | CTTTTTTTTTT | 11 | CTTTTTTTTTTT | 12 | INS |
| Scaffold_389 | 9368 | GAAAAAAAAAAA | 12 | GAAAAAAAAAAAA | 13 | INS |
| Scaffold_3890 | 8721 | ATTTTTTTTTTTT | 13 | ATTTTTTTTTTT | 12 | DEL |
| Scaffold_3895 | 55339 | ATTTTTTTTTT | 11 | ATTTTTTTTTTT | 12 | INS |
| Scaffold_39 | 762881 | CTTTTTTTTTTTTTT | 15 | CTTTTTTTTTTTTTTT | 16 | INS |
| Scaffold_39 | 763354 | TAGAGAGAGAGAGAGAGAGAGAG | 23 | TAGAGAGAGAGAGAGAGAGAGAGAG | 25 | INS |
| Scaffold_39 | 982440 | GTTTTTTTTTT | 11 | GTTTTTTTTTTT | 12 | INS |
| Scaffold_39 | 1127669 | ATTTTTTTTTTT | 12 | ATTTTTTTTTTTT | 13 | INS |
| Scaffold_39 | 1233450 | GTATATATATATATATATA | 19 | GTATATATATATATATATATA | 21 | INS |
| Scaffold_39 | 1268147 | GTTTTTTTTTT | 11 | GTTTTTTTTTTT | 12 | INS |
| Scaffold_39 | 1384443 | ATTTTTTTTTT | 11 | ATTTTTTTT | 9 | DEL |
| Scaffold_3900 | 7496 | GAAAAAAAAAAA | 12 | GAAAAAAAAAAAA | 13 | INS |
| Scaffold_3908 | 292 | GAAAAAAAAA | 10 | GAAAAAAAAAAA | 12 | INS |
| Scaffold_391 | 7209 | CTTTTTTTTT | 10 | CTTTTTTTTTT | 11 | INS |
| Scaffold_392 | 52255 | ATTTTTTTTTT | 11 | ATTTTTTTTTTT | 12 | INS |
| Scaffold_3921 | 7144 | ATTTTTTTTTT | 11 | ATTTTTTTTTTT | 12 | INS |
| Scaffold_3922 | 20059 | TAAAAAAAAA | 10 | TAAAAAAAAAA | 11 | INS |