RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_61
|
705944
|
A
|
G
|
25
|
693.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_61
|
717265
|
G
|
A
|
47
|
1552.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_61
|
741313
|
G
|
A
|
23
|
49.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1047420
|
A
|
G
|
38
|
57.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1182103
|
T
|
C
|
17
|
156.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1182125
|
C
|
T
|
15
|
240.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1232614
|
G
|
A
|
12
|
33.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1249567
|
G
|
A
|
12
|
352.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_61
|
1253628
|
T
|
C
|
31
|
56.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_61
|
1301421
|
C
|
T
|
10
|
324.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_62
|
278857
|
C
|
T
|
19
|
269.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
278866
|
A
|
G
|
18
|
264.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
278964
|
T
|
C
|
16
|
269.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
278976
|
T
|
C
|
14
|
55.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
397065
|
C
|
T
|
19
|
273.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
397172
|
T
|
C
|
60
|
248.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_62
|
498037
|
C
|
T
|
11
|
334.78
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_62
|
516559
|
T
|
C
|
102
|
3072.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_62
|
517093
|
T
|
C
|
99
|
2662.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_62
|
729355
|
T
|
C
|
17
|
366.78
|
exon
|
Transition
|
1/1
|
noncoding
|