RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_91
|
213329
|
C
|
T
|
18
|
412.74
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_92
|
306698
|
C
|
T
|
10
|
165.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_93
|
126398
|
A
|
G
|
69
|
2044.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_93
|
128220
|
G
|
A
|
116
|
3310.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_94
|
351972
|
C
|
T
|
54
|
493.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_94
|
352053
|
C
|
T
|
46
|
222.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_95
|
3621
|
C
|
T
|
17
|
443.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_96
|
133193
|
T
|
C
|
28
|
859.18
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_98
|
116023
|
T
|
C
|
41
|
1472.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_98
|
116380
|
T
|
C
|
54
|
1788.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_98
|
272856
|
G
|
A
|
11
|
39.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_98
|
305708
|
A
|
G
|
16
|
395.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_99
|
29808
|
T
|
A,G
|
55
|
1462.77
|
intron
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_99
|
29832
|
T
|
C
|
250
|
223.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
29957
|
T
|
C
|
250
|
721.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
30136
|
T
|
C
|
248
|
501.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
30213
|
T
|
C
|
250
|
35.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
30282
|
A
|
G
|
250
|
200.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
30316
|
T
|
C
|
250
|
371.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_99
|
30381
|
T
|
C
|
250
|
443.77
|
CDS
|
Transition
|
0/1
|
noncoding
|