RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_108
|
489620
|
A
|
G
|
16
|
434.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_108
|
489636
|
C
|
T
|
12
|
312.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_109
|
424024
|
A
|
G
|
27
|
53.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_110
|
61075
|
T
|
C
|
20
|
682.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_110
|
61076
|
A
|
C,T
|
12
|
271.77
|
intron
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_112
|
174120
|
A
|
G
|
19
|
431.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
176503
|
A
|
G
|
23
|
142.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
176554
|
C
|
T
|
31
|
392.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
176565
|
A
|
G
|
31
|
353.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
176629
|
G
|
A
|
15
|
210.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
177060
|
T
|
C
|
18
|
37.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
178102
|
C
|
T
|
25
|
179.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
178590
|
A
|
G
|
11
|
52.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
226248
|
C
|
T
|
17
|
95.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_112
|
323768
|
A
|
G
|
24
|
786.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_112
|
328744
|
C
|
T
|
12
|
332.78
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_113
|
268442
|
C
|
T
|
35
|
914.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_113
|
299055
|
C
|
T
|
26
|
31.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_114
|
435388
|
C
|
T
|
31
|
572.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_115
|
195777
|
G
|
A
|
51
|
929.77
|
CDS
|
Transition
|
0/1
|
noncoding
|