RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_341
|
30425
|
T
|
C
|
17
|
203.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_343
|
79825
|
T
|
C
|
13
|
180.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_343
|
79827
|
T
|
C
|
14
|
146.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_343
|
79842
|
A
|
G
|
12
|
126.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_345
|
53717
|
G
|
A
|
18
|
517.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_347
|
69273
|
T
|
C
|
16
|
52.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_358
|
29967
|
G
|
A
|
13
|
447.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_374
|
69186
|
G
|
A
|
24
|
716.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_375
|
64586
|
C
|
T
|
10
|
61.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_376
|
63315
|
C
|
T
|
42
|
535.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_378
|
15363
|
C
|
T
|
10
|
110.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_378
|
15730
|
G
|
A
|
11
|
61.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_378
|
15751
|
G
|
A
|
18
|
258.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_378
|
15818
|
A
|
G
|
29
|
297.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_381
|
45171
|
G
|
A
|
13
|
346.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_389
|
9618
|
C
|
T
|
55
|
60.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_390
|
73241
|
A
|
G
|
10
|
64.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_392
|
28141
|
C
|
T
|
76
|
1763.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_395
|
43858
|
T
|
C
|
12
|
149.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_400
|
10049
|
A
|
G
|
10
|
38.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|