RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_2500
|
56660
|
T
|
C
|
42
|
1493.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2500
|
56661
|
T
|
C
|
29
|
1016.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2501
|
36853
|
T
|
C
|
13
|
388.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2501
|
69882
|
A
|
G
|
36
|
208.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2502
|
43695
|
T
|
C
|
17
|
517.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2502
|
46378
|
T
|
C
|
72
|
2405.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2502
|
57529
|
T
|
C
|
11
|
389.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2502
|
57531
|
T
|
C
|
11
|
429.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2502
|
97576
|
A
|
G
|
11
|
260.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2504
|
69830
|
G
|
A
|
11
|
58.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2519
|
23497
|
A
|
G
|
15
|
439.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2519
|
105132
|
C
|
T
|
13
|
295.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2526
|
70889
|
T
|
C
|
11
|
314.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2526
|
70897
|
G
|
A
|
11
|
160.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2526
|
110202
|
T
|
C
|
11
|
304.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2527
|
1889
|
A
|
G
|
22
|
719.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2530
|
21647
|
G
|
A
|
10
|
42.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2530
|
71698
|
G
|
A
|
31
|
928.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2530
|
71844
|
C
|
T
|
11
|
104.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2535
|
110637
|
T
|
C
|
66
|
2189.77
|
CDS
|
Transition
|
1/1
|
noncoding
|