RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_2536
|
29567
|
T
|
C
|
15
|
30.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2536
|
62039
|
C
|
T
|
10
|
290.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2536
|
62081
|
T
|
C
|
32
|
931.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2536
|
62164
|
T
|
C
|
12
|
413.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2538
|
66162
|
G
|
A
|
16
|
464.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2538
|
66171
|
C
|
T
|
13
|
350.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2540
|
58665
|
T
|
C
|
16
|
435.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2543
|
35780
|
C
|
T
|
19
|
570.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2543
|
35793
|
T
|
C
|
27
|
659.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2543
|
35901
|
G
|
A
|
16
|
327.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2544
|
50343
|
C
|
T
|
19
|
180.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2544
|
50345
|
A
|
G
|
19
|
176.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2544
|
50367
|
G
|
A
|
26
|
416.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2546
|
3533
|
C
|
T
|
11
|
235.84
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2546
|
44522
|
C
|
T
|
21
|
534.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_2549
|
73033
|
T
|
C
|
80
|
79.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2550
|
76057
|
T
|
C
|
31
|
44.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2551
|
30067
|
A
|
G
|
11
|
67.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2551
|
30073
|
G
|
A
|
11
|
70.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_2552
|
16579
|
T
|
C
|
13
|
32.77
|
CDS
|
Transition
|
0/1
|
noncoding
|