| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3862 | 35989 | G | A | 16 | 66.77 | CDS | Transition | 0/1 | Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82) |
| Scaffold_3862 | 36025 | G | A | 22 | 139.77 | CDS | Transition | 0/1 | Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82) |
| Scaffold_458 | 29690 | A | G | 45 | 845.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 29708 | T | C | 70 | 32.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30077 | C | T | 45 | 1551.77 | exon | Transition | 1/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30238 | A | G | 180 | 1289.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30332 | G | A | 212 | 2098.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30398 | T | C | 98 | 1530.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30407 | C | T | 92 | 1713.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30430 | T | C | 102 | 118.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30530 | G | A | 142 | 454.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30536 | T | C | 145 | 236.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_458 | 30548 | T | C | 147 | 268.77 | exon | Transition | 0/1 | Eukaryotic translation initiation factor 5 (eIF-5) |
| Scaffold_1654 | 40730 | G | A | 10 | 299.78 | noncoding | Transition | 1/1 | Expansin-A5 (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.4) |
| Scaffold_3040 | 27108 | G | A | 13 | 109.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 27170 | T | C | 20 | 179.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 27218 | T | C | 11 | 73.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 27643 | T | C | 12 | 190.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_3040 | 27671 | C | T | 12 | 92.77 | CDS | Transition | 0/1 | Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter) |
| Scaffold_27 | 817980 | C | T | 31 | 67.77 | CDS | Transition | 0/1 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |