RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3004
|
41044
|
C
|
T
|
26
|
461.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3004
|
41088
|
G
|
A
|
18
|
302.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3007
|
23461
|
C
|
T
|
250
|
1530.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3007
|
23546
|
C
|
T
|
249
|
3924.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3007
|
23682
|
C
|
T
|
249
|
363.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3008
|
34177
|
C
|
T
|
14
|
305.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3010
|
49619
|
T
|
C
|
250
|
256.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3010
|
49654
|
A
|
G
|
250
|
133.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3015
|
42044
|
T
|
C
|
11
|
294.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3017
|
7834
|
A
|
G
|
12
|
312.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3017
|
8990
|
A
|
G
|
40
|
42.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3017
|
45977
|
C
|
T
|
22
|
548.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3018
|
2932
|
A
|
G
|
31
|
921.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3018
|
3512
|
G
|
A
|
15
|
432.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3018
|
3537
|
G
|
A
|
18
|
478.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3018
|
62143
|
A
|
G
|
18
|
372.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3018
|
62399
|
A
|
G
|
19
|
686.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3018
|
62404
|
C
|
T
|
17
|
360.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3021
|
11109
|
T
|
C
|
38
|
1301.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3022
|
42363
|
G
|
A
|
15
|
487.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|