RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3445
|
11327
|
C
|
T
|
178
|
2959.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3446
|
37261
|
G
|
A
|
53
|
99.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3446
|
37734
|
G
|
A
|
77
|
49.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3446
|
42612
|
G
|
A
|
54
|
138.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3448
|
20381
|
G
|
A
|
14
|
393.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3449
|
9141
|
A
|
G
|
10
|
30.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3452
|
2222
|
G
|
A
|
22
|
679.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3452
|
30074
|
G
|
A
|
10
|
232.84
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3455
|
940
|
A
|
G
|
11
|
290.78
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3455
|
995
|
C
|
T
|
37
|
78.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3455
|
1017
|
C
|
T
|
34
|
83.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3455
|
1028
|
C
|
T
|
35
|
748.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3456
|
46987
|
G
|
A
|
18
|
630.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3456
|
47031
|
C
|
T
|
17
|
293.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3456
|
47034
|
C
|
T
|
13
|
208.84
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3459
|
20634
|
C
|
T
|
74
|
914.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3461
|
55078
|
A
|
G
|
65
|
1243.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3463
|
7764
|
A
|
G
|
250
|
175.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3463
|
7928
|
C
|
T
|
78
|
2845.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3463
|
74093
|
T
|
C
|
250
|
512.77
|
CDS
|
Transition
|
0/1
|
noncoding
|