RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3549
|
11938
|
T
|
C
|
27
|
53.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3556
|
5041
|
T
|
C
|
45
|
597.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3559
|
43745
|
T
|
C
|
18
|
253.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3562
|
1122
|
G
|
A
|
15
|
187.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3562
|
1154
|
T
|
C
|
11
|
110.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3563
|
25375
|
C
|
T
|
10
|
346.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3566
|
4101
|
G
|
A
|
15
|
480.96
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3566
|
44579
|
T
|
C
|
250
|
466.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3566
|
44580
|
T
|
C
|
250
|
1806.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3570
|
29034
|
C
|
T
|
50
|
1826.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3570
|
63905
|
C
|
A,G
|
23
|
729.77
|
noncoding
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_3572
|
12050
|
C
|
T
|
246
|
1721.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
12191
|
C
|
T
|
50
|
201.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13115
|
C
|
T
|
235
|
2551.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13376
|
C
|
T
|
250
|
251.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13408
|
C
|
T
|
249
|
5596.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13423
|
C
|
T
|
231
|
2475.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13438
|
C
|
T
|
250
|
1601.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13454
|
C
|
T
|
250
|
73.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13520
|
C
|
T
|
250
|
433.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|