RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3572
|
13596
|
C
|
T
|
199
|
3868.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13733
|
C
|
T
|
102
|
1577.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3572
|
13751
|
C
|
T
|
88
|
937.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3573
|
18086
|
C
|
T
|
19
|
695.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3573
|
18088
|
G
|
A
|
85
|
3303.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3574
|
51002
|
C
|
T
|
14
|
493.77
|
intron
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3574
|
51533
|
T
|
C
|
14
|
163.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3574
|
52463
|
G
|
A
|
20
|
419.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3574
|
52547
|
C
|
T
|
11
|
224.84
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3581
|
52483
|
T
|
C
|
19
|
642.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3581
|
52621
|
A
|
G
|
10
|
324.78
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3582
|
12
|
C
|
T
|
12
|
64.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3584
|
15190
|
C
|
T
|
250
|
9193.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3584
|
15192
|
G
|
A
|
250
|
9683.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3585
|
46388
|
C
|
T
|
76
|
2105.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3585
|
46444
|
A
|
C,G
|
98
|
2229.77
|
noncoding
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_3585
|
46846
|
A
|
G
|
99
|
1264.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3585
|
46939
|
G
|
A
|
127
|
1138.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3588
|
15936
|
A
|
G
|
19
|
584.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3589
|
16592
|
C
|
T
|
12
|
310.78
|
intron
|
Transition
|
1/1
|
noncoding
|