RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3674
|
3937
|
G
|
A
|
23
|
557.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
3981
|
C
|
T
|
72
|
184.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
4070
|
T
|
C
|
113
|
315.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
4088
|
G
|
A
|
133
|
2730.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
4197
|
G
|
A
|
124
|
2805.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
4201
|
A
|
G
|
124
|
144.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
4269
|
T
|
C
|
35
|
884.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3674
|
25327
|
G
|
A
|
11
|
212.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
590
|
T
|
C
|
18
|
488.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3678
|
13967
|
G
|
A
|
73
|
1293.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
14076
|
A
|
G
|
29
|
740.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
14092
|
C
|
T
|
20
|
409.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
14323
|
T
|
C
|
20
|
219.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
14401
|
A
|
G
|
19
|
248.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3678
|
33317
|
C
|
T
|
10
|
306.78
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3681
|
16196
|
T
|
C
|
23
|
100.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3681
|
16871
|
T
|
C
|
15
|
463.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3681
|
16873
|
G
|
A
|
14
|
421.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3681
|
16916
|
A
|
G
|
10
|
264.8
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3681
|
17060
|
T
|
C
|
18
|
478.77
|
CDS
|
Transition
|
1/1
|
noncoding
|