RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3888
|
47873
|
C
|
T
|
249
|
2119.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3888
|
47883
|
T
|
C
|
250
|
136.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3890
|
27285
|
A
|
C,T
|
13
|
416.77
|
intron
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_3892
|
52366
|
C
|
T
|
26
|
760.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3892
|
54476
|
C
|
T
|
14
|
431.77
|
noncoding
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3893
|
3648
|
C
|
T
|
14
|
120.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3893
|
3659
|
A
|
G
|
22
|
39.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3893
|
3724
|
C
|
T
|
52
|
48.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3894
|
33748
|
C
|
T
|
51
|
377.77
|
intron
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3894
|
33754
|
G
|
A
|
51
|
451.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3895
|
55633
|
T
|
A,G
|
49
|
1591.77
|
noncoding
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_3896
|
51450
|
A
|
G
|
21
|
102.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
7213
|
G
|
A
|
15
|
406.74
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
12323
|
C
|
T
|
19
|
395.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
12538
|
C
|
T
|
10
|
124.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
12549
|
G
|
A
|
10
|
127.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
14129
|
C
|
T
|
13
|
156.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
14751
|
G
|
A
|
11
|
33.77
|
CDS
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3898
|
14759
|
A
|
G
|
14
|
416.77
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3898
|
38573
|
T
|
C
|
33
|
876.77
|
exon
|
Transition
|
1/1
|
noncoding
|