RGC-1066 SNPs
| SNP Id |
Position |
Reference Allele |
Alternate Allele |
DP |
Quality |
Located At |
Type |
Genotype |
Function |
|
Scaffold_3961
|
9252
|
C
|
T
|
247
|
5826.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3961
|
56737
|
T
|
C
|
18
|
36.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3961
|
56738
|
A
|
G
|
16
|
371.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3961
|
59534
|
C
|
T
|
13
|
376.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3961
|
59724
|
T
|
C
|
25
|
737.77
|
exon
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3963
|
20450
|
G
|
A
|
10
|
225.84
|
CDS
|
Transition
|
1/1
|
noncoding
|
|
Scaffold_3968
|
30256
|
T
|
C
|
22
|
205.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
44856
|
T
|
C
|
62
|
1430.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
45294
|
A
|
G
|
65
|
1638.88
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
45438
|
G
|
A
|
33
|
650.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
45506
|
T
|
C
|
32
|
675.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
45625
|
A
|
G
|
44
|
834.77
|
exon
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3969
|
45814
|
C
|
A,G
|
43
|
1116.77
|
exon
|
Transition
|
1/2
|
noncoding
|
|
Scaffold_3971
|
25104
|
T
|
C
|
250
|
1955.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25106
|
A
|
G
|
249
|
945.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25118
|
T
|
C
|
250
|
807.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25149
|
A
|
G
|
250
|
40.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25194
|
A
|
G
|
250
|
442.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25206
|
T
|
C
|
250
|
1211.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|
|
Scaffold_3971
|
25208
|
T
|
C
|
250
|
2518.77
|
noncoding
|
Transition
|
0/1
|
noncoding
|