| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_3108 | 22117 | A | G | 37 | 311.77 | CDS | Transition | 0/1 | Ribonuclease TUDOR 1 (AtTudor1) (TUDOR-SN protein 1) (EC 3.1.-.-) |
| Scaffold_3108 | 22449 | C | T | 22 | 40.77 | CDS | Transition | 0/1 | Ribonuclease TUDOR 1 (AtTudor1) (TUDOR-SN protein 1) (EC 3.1.-.-) |
| Scaffold_3108 | 22450 | A | G | 26 | 182.77 | CDS | Transition | 0/1 | Ribonuclease TUDOR 1 (AtTudor1) (TUDOR-SN protein 1) (EC 3.1.-.-) |
| Scaffold_3108 | 22551 | A | G | 120 | 1902.77 | CDS | Transition | 0/1 | Ribonuclease TUDOR 1 (AtTudor1) (TUDOR-SN protein 1) (EC 3.1.-.-) |
| Scaffold_3961 | 9201 | C | T | 250 | 7351.77 | noncoding | Transition | 0/1 | Ribosomal protein S1, mitochondrial |
| Scaffold_2882 | 23149 | C | T | 250 | 6146.77 | noncoding | Transition | 0/1 | Ribosomal protein S10, mitochondrial |
| Scaffold_3222 | 81760 | C | T | 250 | 7825.77 | CDS | Transition | 0/1 | Ribosomal protein S10, mitochondrial |
| Scaffold_3222 | 81802 | C | T | 250 | 1245.77 | exon | Transition | 0/1 | Ribosomal protein S10, mitochondrial |
| Scaffold_2778 | 54048 | C | T | 250 | 2891.77 | intron | Transition | 0/1 | Ribosomal protein S14, mitochondrial |
| Scaffold_2778 | 54098 | C | T | 250 | 8002.77 | intron | Transition | 1/1 | Ribosomal protein S14, mitochondrial |
| Scaffold_2778 | 54175 | C | T | 250 | 8619.77 | CDS | Transition | 1/1 | Ribosomal protein S14, mitochondrial |
| Scaffold_3717 | 17110 | C | T | 58 | 1878.77 | noncoding | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6400 | C | T | 250 | 1495.77 | intron | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6786 | C | T | 250 | 7244.77 | exon | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 6987 | C | T | 250 | 8616.77 | noncoding | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3746 | 7065 | C | T | 241 | 138.77 | noncoding | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3843 | 32182 | C | T | 250 | 98.77 | noncoding | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3843 | 32281 | C | T | 250 | 8022.77 | noncoding | Transition | 1/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3843 | 32422 | C | T | 249 | 7746.77 | noncoding | Transition | 0/1 | Ribosomal protein S3, mitochondrial |
| Scaffold_3843 | 32559 | C | T | 250 | 802.77 | noncoding | Transition | 0/1 | Ribosomal protein S3, mitochondrial |