| SNP Id | Position | Reference Allele | Alternate Allele | DP | Quality | Located At | Type | Genotype | Function |
| Scaffold_2495 | 104307 | T | C | 11 | 67.77 | exon | Transition | 0/1 | U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (RING-type E3 ubiquitin transferase PUB30) |
| Scaffold_2495 | 104337 | T | C | 15 | 180.77 | exon | Transition | 0/1 | U-box domain-containing protein 30 (EC 2.3.2.27) (Plant U-box protein 30) (RING-type E3 ubiquitin transferase PUB30) |
| Scaffold_53 | 1116352 | G | A | 16 | 403.77 | CDS | Transition | 1/1 | U-box domain-containing protein 45 (EC 2.3.2.27) (Plant U-box protein 45) (RING-type E3 ubiquitin transferase PUB45) |
| Scaffold_140 | 372752 | T | C | 11 | 378.77 | intron | Transition | 1/1 | UDP-D-apiose/UDP-D-xylose synthase 2 |
| Scaffold_2695 | 106840 | C | T | 20 | 447.77 | CDS | Transition | 1/1 | UDP-glycosyltransferase 73C2 (EC 2.4.1.-) |
| Scaffold_3015 | 8650 | T | C | 11 | 269.8 | exon | Transition | 1/1 | UDP-glycosyltransferase 87A1 (EC 2.4.1.-) |
| Scaffold_3763 | 37575 | T | C | 52 | 591.77 | CDS | Transition | 0/1 | UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2) |
| Scaffold_3763 | 37587 | A | G | 66 | 684.77 | CDS | Transition | 0/1 | UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2) |
| Scaffold_3763 | 37692 | T | C | 24 | 268.77 | CDS | Transition | 0/1 | UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2) |
| Scaffold_3763 | 38914 | C | T | 47 | 825.77 | CDS | Transition | 0/1 | UDP-rhamnose/UDP-galactose transporter 1 (UDP-Rha/UDP-Gal transporter 1) (UDP-galactose transporter 2) (At-UDP-GalT2) |
| Scaffold_3115 | 13359 | C | T | 35 | 73.77 | exon | Transition | 0/1 | Uncharacterized mitochondrial protein AtMg00860 (ORF158) |
| Scaffold_3332 | 23979 | C | T | 16 | 403.77 | CDS | Transition | 1/1 | Uncharacterized mitochondrial protein AtMg00860 (ORF158) |
| Scaffold_3789 | 16635 | A | G | 13 | 312.78 | CDS | Transition | 1/1 | Uncharacterized mitochondrial protein AtMg00860 (ORF158) |
| Scaffold_3794 | 30989 | C | T | 30 | 1002.77 | noncoding | Transition | 1/1 | Uncharacterized mitochondrial protein AtMg00860 (ORF158) |
| Scaffold_3117 | 29459 | C | T | 250 | 6614.77 | CDS | Transition | 0/1 | Uncharacterized mitochondrial protein ymf11 (ORF7323) |
| Scaffold_3117 | 29087 | C | T | 250 | 2794.77 | CDS | Transition | 0/1 | Uncharacterized mitochondrial protein ymf40 (ORF502) |
| Scaffold_3117 | 29151 | C | T | 250 | 609.77 | CDS | Transition | 0/1 | Uncharacterized mitochondrial protein ymf40 (ORF502) |
| Scaffold_3117 | 29248 | C | T | 250 | 7850.77 | CDS | Transition | 1/1 | Uncharacterized mitochondrial protein ymf40 (ORF502) |
| Scaffold_3117 | 29291 | C | T | 249 | 6996.77 | CDS | Transition | 0/1 | Uncharacterized mitochondrial protein ymf40 (ORF502) |
| Scaffold_3117 | 29381 | C | T | 250 | 6642.77 | CDS | Transition | 0/1 | Uncharacterized mitochondrial protein ymf40 (ORF502) |